PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT05508
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 631aa    MW: 68842.4 Da    PI: 8.704
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT05508genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.56.5e-201803083128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk...kvkaeekewyfFsk.rdkkyatgkrknratksgy..Wkatgkdkevlskk 96 
                G++F+Pt      +yL++ v +++  ++++vi+e+++y++eP+dL +   ++  ++++ +fF++ +++k+ +g r +r++ sg   W + gk k+v +  
  EMT05508 180 CGMKFNPTPAVATGFYLRRWVLRQQlPDTARVIREARVYDSEPKDLAAvfpRLP-GTHDRFFFTTcKRQKAGRGYRISRTAGSGAggWASNGK-KAVQNDA 278
               7*********************9995455677**************85344333.4556677766155566689*****87755444*****9.788888* PP

       NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
               ge++g  +tL +  ++++  +++dW+m+ey++
  EMT05508 279 GETIGFLDTLRYSYKDKN--KESDWLMEEYHI 308
               ************855554..49********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500968.846110138IPR000048IQ motif, EF-hand binding site
PfamPF006127.1E-5112129IPR000048IQ motif, EF-hand binding site
SuperFamilySSF1019417.59E-24168331IPR003441NAC domain
PROSITE profilePS5100525.898178331IPR003441NAC domain
PfamPF023653.4E-10181308IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 631 aa     Download sequence    Send to blast
MGKAGRWLRS FLTGKKARDK GTDDGLPAPA KEKRRWSFRR PAASVSARDT ISATSGCQGK  60
GQLASTSSHC FSEVHAVTVQ DQHAVGAAAP HEVAITAAKA PPEGSTCDAE EAAAVKIQSA  120
FRSYLARTAL CALRGMVKLQ AIVRGQLHKC VAYQPACLRS YDTICYDTIG TAVAHAALRC  180
GMKFNPTPAV ATGFYLRRWV LRQQLPDTAR VIREARVYDS EPKDLAAVFP RLPGTHDRFF  240
FTTCKRQKAG RGYRISRTAG SGAGGWASNG KKAVQNDAGE TIGFLDTLRY SYKDKNKESD  300
WLMEEYHICG LDQFAVDDKG EERVLCKIYV SPGSKQGSVT RQQSEAGDHL LVERGVAGAH  360
AAMVVQPQPP RPHEPRQPRV NKKPAFPRPQ EARKPQVIQK PPPPRALDKR RVPTPTQQAP  420
KRRAPPIAEP PRPKRIRAAA AVPASAALSA VNVAVRQAIG GWNSPKRPSW NPSEPPAFLS  480
APPPQRHATI SPRKSHPALT KDMDDFARSL EVDLEMAEDQ STIQQGGHQS TSGSESQPPE  540
VDMSDLLSWF DADAEELAET REHVQDEQED QPEHARSLEG LVADERGDDV IAQDLFNALN  600
SIGNGDDLIS DGGDTDDWLS LPLSAYNGIM Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3723791e-144AK372379.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3001A07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM8BFJ30.0M8BFJ3_AEGTA; NAC domain-containing protein 68
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2262136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.11e-08NAC domain containing protein 52